CDS

Accession Number TCMCG002C26360
gbkey CDS
Protein Id XP_020108728.1
Location complement(join(6377333..6378152,6378809..6379073,6379156..6379282,6379782..6379895,6380360..6380685,6380993..6381123,6382340..6382737))
Gene LOC109724347
GeneID 109724347
Organism Ananas comosus

Protein

Length 726aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020253139.1
Definition poly(A)-specific ribonuclease PARN isoform X1 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category L
Description CAF1 family ribonuclease
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K01148        [VIEW IN KEGG]
EC 3.1.13.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009751        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGATGATGATGAGGAGGAGGAGGAGCGAATGGCGGCTGGTTCGGGCGTGCTCCCGAACCCTAACCCTAACCCTAACCCTAGGCCCGTCTCGCCCCATCTCCTCCGGCGAGGCGGGGGGAAGCGGGGGCGGCGCGGCGGTGAAGAAGGTGACGAGGTGGAACTTCGCGGAGGCTTTGGAAGGGCTCCGGGCGCGGGTGCGGGAAGCGGACTTCGTGGCGGTGGATCTGGAGATGACGGGCGTGACGACCGCGCCCTGGCGGGACGCCTTCGAGTTCGACCGCCCCGACGTCCGCTACCTCAAGCTCAGGGACTCCGCCCGCAGCTTCGCCGTCGTCCAGCTCGGCGTCTGCCCCTTCCGCTGGCACGCCGCCACCTCCTCCTTCCGCGCCCACCCCCACAATTTTTATATATTTCCGCGAAAGGAGCTCCCAATTGATGGGCCGTCTTATGAGTTCCTCTGCCAGACAACTTCGATGGACTTCCTAGCGAAGTACCAATTTGATTTCAATACATGCATAAATGAAGGAATATCTTATTTATCCAGAGCACAAGAGATAGAAGCGCTTCGAAAATTACGGCCGCAGTATGAGGACAGTTCAGCAGCACCGTCACACACTTTTGAAGAGCTTGGAGATATACCAATTGTGAGCACTGCTGACCTGCTTTTCACGGAAAGAATGAAAAACAGATTTACTGAGTGGCGAGAAGGGATACTCAGAAGTCCAAGTGAGGATTCTTCTGAAGAGAGTCTGAAATTCAGCACAGTGCAATTTCAGACAGTTTTCTTTAAGATGCGACCAGCTATCATGCTTAATGGATTCAGCTCACATCAACTGAAGTTGATTCAACTGATTCTGAGAAAACACTTCAAGGATCTTTTATATGTTCGTACAGTTGGTGAGGATGGTACATGGCAAAAGAGAGTAGTTTATACGGACTCTGAGGAGGATAAAGCCTCTTTGTTGAAAGAGGTCCAGGAAGATGCAACGAGGAGCACTGTCTCGAGGGTCAGGTCTGCTGTGGGATTTCGCCATGTTATAGATCTGCTTGCCTCAGAACAGAAATTAATTGTTGGTCACAATTGCCTTTTAGATATTGCTCACATATACAACAAATTTATTGGCCCTCTTCCGTCATCGATGGCAGAGTTTGTTTTAGCCGTTCATGAAATTTTTCCGTATGTTGTGGACACCAAGCATCTTTTGAATTCAAGTCAAGGCATTCAATATTTCATGAAGAAGAAGAGCAAATCGCTTTCCTCAGCTTTTTCTTTGCTGTGCCCGGCAGTCTCCTCTCCATCCAAGAATTTCGGCACAAGTTCACATGTGAAAGTTGAAGTTGAATCAGATGAAGCAGGATCATCTTGCTTCTCCTCAGGCGCTAAGCATGAAGCAGGATACGATGCCTTTATGACGGGATGCGTCTTTGCTCAGATATGCTGTCATTTGGGTGTGAATTTTGAGCTCCTTTCACCATCAGCCAATCTTACAAAAATTGATCGGCTTGCACCGTACATCAATCTTTTGTATCCCGCGTGGAACAGCGGAACAGTGATCAATCTTAGTACTGGCACAGAGAAACCAGAGCCAGGTTATAAGCGCAATTACCCTCCGGTTGTGTTCTCAAAAGTCATCCTTGTTTGGGGATTTCCGTCTAAGTTGAAGCCAAAGGACTTGAAGGAGTCCATATGCAAAGTGTTTGGTCCGGATTCTGTCACTTCAATCTTTTTCATCGACTCGACCGCCGCCCTTATTCAGTTAAGCAAAGAGGAATTTGTAAATGATTTTTTGCTTTTGAAGGATACTTTGGAGAGGAAAGATGATGCCATATCAGTTTTGCACCCTCTTTCGGTGCTATTGGAAGGTGGAAATACACGGGCTGGGAATTACGATACTTACAGAGACATTTGTGCAGCTTCGGCGTCGAAGTTTTTGTTCGCGGATCAGGCAGATGCCGTCGGGACAACGTGCAAAAGAAAACTAGACTTTGGTAGTAGAGATTCTGCTGGGAGCAGTGAGACTACTGAAGTGGAAACCATTTCGCCAGATGTTAAACGGCTTGAAGGACTAAAACCTGATCCCAAGAAGCAATCTAGCCGCCCACTTTCATGCGAGGATATCTTAGACTCTTTGTATGCTTCGAAATCATTATTGGGGAAACGCATGAGAAGCGCATGA
Protein:  
MMMMMRRRRSEWRLVRACSRTLTLTLTLGPSRPISSGEAGGSGGGAAVKKVTRWNFAEALEGLRARVREADFVAVDLEMTGVTTAPWRDAFEFDRPDVRYLKLRDSARSFAVVQLGVCPFRWHAATSSFRAHPHNFYIFPRKELPIDGPSYEFLCQTTSMDFLAKYQFDFNTCINEGISYLSRAQEIEALRKLRPQYEDSSAAPSHTFEELGDIPIVSTADLLFTERMKNRFTEWREGILRSPSEDSSEESLKFSTVQFQTVFFKMRPAIMLNGFSSHQLKLIQLILRKHFKDLLYVRTVGEDGTWQKRVVYTDSEEDKASLLKEVQEDATRSTVSRVRSAVGFRHVIDLLASEQKLIVGHNCLLDIAHIYNKFIGPLPSSMAEFVLAVHEIFPYVVDTKHLLNSSQGIQYFMKKKSKSLSSAFSLLCPAVSSPSKNFGTSSHVKVEVESDEAGSSCFSSGAKHEAGYDAFMTGCVFAQICCHLGVNFELLSPSANLTKIDRLAPYINLLYPAWNSGTVINLSTGTEKPEPGYKRNYPPVVFSKVILVWGFPSKLKPKDLKESICKVFGPDSVTSIFFIDSTAALIQLSKEEFVNDFLLLKDTLERKDDAISVLHPLSVLLEGGNTRAGNYDTYRDICAASASKFLFADQADAVGTTCKRKLDFGSRDSAGSSETTEVETISPDVKRLEGLKPDPKKQSSRPLSCEDILDSLYASKSLLGKRMRSA